Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_15814348_15817854_R

Intron Information:

Intron Rank:

135848

Intron Class:

major

Intron Phase:

Intron Coordinates:

15814348 - 15817854

Intron Length:

3507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAG

U12 Branch Point Sequence:

GGTCCCAAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

53.4

0.08

1.7

72.5

43.5

Major PPT

0.83

0.8

83.9

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

48.5

-0

1.9

68.32

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033603

15813218 - 15819477

6260

ENSAPLT00000022713

15813218 - 15827872

14655