Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_16011173_16011514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16011173 - 16011514

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

TCCTTTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GTCCTTATAATA

Flanking Amino Acid:

ISMKILTALKKHGYEKPTPI

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

71.6

40.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.9

0.63

82.6

26.5

Minor 5ss

40.4

-1.1

2.9

41.4

Minor BPS

48.8

-0

1.5

57.67

Associated Gene:

Gene:

DDX46

Ensembl Gene ID:

ENSAPLG00000013208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013790

15998283 - 16019450

21168