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Intron Name: Anas_platyrhynchos_platyrhynchos_14_16033081_16033680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16033081 - 16033680

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TGAACTGTACTT

Flanking Amino Acid:

LYRVDNLTDEGALNINDRTI

Intron Amino Acid Position:

961

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

84.2

0.77

0.6

82.6

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

-0.3

2.2

61.78

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014456

16031437 - 16051011

19575

ENSAPLT00000039524

16031437 - 16051011

19575