Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_16033819_16033966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16033819 - 16033966

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTTCTGTAACG

Flanking Amino Acid:

PLYVLALLKQKAFQTGTNAR

Intron Amino Acid Position:

915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

0.81

0.8

80.6

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

0.43

2.1

78.9

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014456

16031437 - 16051011

19575

ENSAPLT00000039524

16031437 - 16051011

19575