Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_16037145_16037466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16037145 - 16037466

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTAAATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCCTAAATT

Flanking Amino Acid:

LLVNLNENKELIQDLLRTLP

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.7

0.53

0.9

66.5

38.1

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

76.1

0.9

1.6

90.25

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014456

16031437 - 16051011

19575

ENSAPLT00000039524

16031437 - 16051011

19575