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Intron Name: Anas_platyrhynchos_platyrhynchos_14_16226189_16237659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16226189 - 16237659

Intron Length:

11471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

AATCTCACAATT

Flanking Amino Acid:

EGQVKSLCEKAKEILTKESN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

81.2

0.7

0.9

73.5

41.9

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

47.8

-0

1.7

66.45

37.8

Associated Gene:

Gene:

PPP2CA

Ensembl Gene ID:

ENSAPLG00000014864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015498

16226087 - 16241015

14929