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Intron Name: Anas_platyrhynchos_platyrhynchos_14_16237870_16238360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16237870 - 16238360

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTATGTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGCCTCTAAAAT

Flanking Amino Acid:

ETVTLLVALKVRYRERITIL

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.8

0.58

0.9

69.4

41.1

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

49.6

0.05

1.8

66.95

43.5

Associated Gene:

Gene:

PPP2CA

Ensembl Gene ID:

ENSAPLG00000014864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015498

16226087 - 16241015

14929