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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1624030_1624200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1624030 - 1624200

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATGATTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

76.5

34.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.3

0.91

0.7

85.5

28.4

Minor 5ss

-1.3

48.1

47.6

Minor BPS

46.1

-0.2

2.2

66.81

43.8

Associated Gene:

Gene:

GABRA1

Ensembl Gene ID:

ENSAPLG00000013482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023863

1623605 - 1661226

37622