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Intron Name: Anas_platyrhynchos_platyrhynchos_14_16257646_16258414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16257646 - 16258414

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTGAT

5'SS Class:

major

3'SS Sequence:

AATCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAAAT

U12 Branch Point Sequence:

AGTGCACTAACG

Flanking Amino Acid:

NDFTEEEEAQVRKENQWCEE

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

35.9

Major BPS

58.2

0.21

1.2

65.3

36.8

Major PPT

81.3

0.71

0.8

77.9

35.5

Minor 5ss

33.4

-1.9

3.5

49.3

46.9

Minor BPS

47.2

-0.3

2.1

56.92

43.8

Associated Gene:

Gene:

SKP1

Ensembl Gene ID:

ENSAPLG00000015147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015785

16252970 - 16258450

5481