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Intron Name: Anas_platyrhynchos_platyrhynchos_14_16277179_16279538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16277179 - 16279538

Intron Length:

2360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCGATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TCTTCCCGATCC

Flanking Amino Acid:

GVGQITPSMGWQSQSVYPLP

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

36.6

Major BPS

0.62

65.3

41.5

Major PPT

70.8

0.47

0.9

61.7

38.7

Minor 5ss

-2.2

3.2

41.8

Minor BPS

49.5

-0

2.1

68.12

43.1

Associated Gene:

Gene:

TCF7

Ensembl Gene ID:

ENSAPLG00000015177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047097

16264808 - 16327533

62726

ENSAPLT00000015826

16269124 - 16327533

58410