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Intron Name: Anas_platyrhynchos_platyrhynchos_14_162866_174885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162866 - 174885

Intron Length:

12020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGAGTC

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTCATGCTAACA

Flanking Amino Acid:

LQGGVGIPHIRWYGQEKDYN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

64.6

40.3

Major BPS

65.7

0.39

71.3

30.3

Major PPT

86.1

0.81

0.8

81.1

35.9

Minor 5ss

34.1

-1.8

3.8

50.5

46.2

Minor BPS

46.3

-0.2

2.3

64.1

42.3

Associated Gene:

Gene:

CSNK1A1

Ensembl Gene ID:

ENSAPLG00000010571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011075

148311 - 175805

27495