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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1637777_1643973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1637777 - 1643973

Intron Length:

6197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGAATTGGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAATT

Flanking Amino Acid:

SFGPVSDHDMEYTIDVFFRQ

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.23

1.1

54.4

45.5

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

73.1

0.8

1.3

88.05

30.7

Associated Gene:

Gene:

GABRA1

Ensembl Gene ID:

ENSAPLG00000013482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023863

1623605 - 1661226

37622

ENSAPLT00000014100

1621653 - 1661226

39574