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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1644195_1645930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1644195 - 1645930

Intron Length:

1736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCACATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTTGCTCACAT

Flanking Amino Acid:

TEDGTLLYTMRLTVRAECPM

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

65.7

0.39

71.3

30.3

Major PPT

66.2

0.37

0.9

58.3

36.9

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

48.6

-0

2.3

77.48

44.6

Associated Gene:

Gene:

GABRA1

Ensembl Gene ID:

ENSAPLG00000013482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023863

1623605 - 1661226

37622

ENSAPLT00000014100

1621653 - 1661226

39574