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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1650459_1654890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1650459 - 1654890

Intron Length:

4432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGAA

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

GTTTTTTTGTTT

Flanking Amino Acid:

VDSGIVQSSTGEYVVMTTHF

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

71.4

33.7

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.74

0.8

81.2

36.5

Minor 5ss

34.4

-1.8

2.9

40.7

45.6

Minor BPS

44.5

-0.3

3.4

74.33

37.3

Associated Gene:

Gene:

GABRA1

Ensembl Gene ID:

ENSAPLG00000013482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023863

1623605 - 1661226

37622

ENSAPLT00000014100

1621653 - 1661226

39574