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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1655044_1657692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1655044 - 1657692

Intron Length:

2649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

AAGACCTAAAAA

Flanking Amino Acid:

RESVPARTVFGVTTVLTMTT

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.4

37.3

Major BPS

69.8

0.49

70.3

31.8

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

-0

1.8

57.3

41.5

Associated Gene:

Gene:

GABRA1

Ensembl Gene ID:

ENSAPLG00000013482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023863

1623605 - 1661226

37622

ENSAPLT00000014100

1621653 - 1661226

39574