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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1657896_1660789_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1657896 - 1660789

Intron Length:

2894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACCA

5'SS Class:

major

3'SS Sequence:

CTTCTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

TACGAATAAAAT

Flanking Amino Acid:

WDGKSVVPEKPKKVKDPLIK

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.2

65.3

40.7

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

89.7

0.89

0.6

88.3

21.4

Minor 5ss

37.8

-1.4

3.1

49.4

46.3

Minor BPS

40.7

-0.6

2.1

56.52

45.2

Associated Gene:

Gene:

GABRA1

Ensembl Gene ID:

ENSAPLG00000013482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023863

1623605 - 1661226

37622

ENSAPLT00000014100

1621653 - 1661226

39574