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Intron Name: Anas_platyrhynchos_platyrhynchos_14_16639321_16689934_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
16639321 - 16689934

Intron Length:
50614

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGAGGA

5'SS Class:
major

3'SS Sequence:
CTCTTCTTGCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAC

U12 Branch Point Sequence:
CTAACACTGACT

Flanking Amino Acid:
SGRFEVTRRKVLYGEDGLHA

Intron Amino Acid Position:
55

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.71
1
66.1
40.1

Major BPS
69.4
0.48
1.1
69.6
35.5

Major PPT
77.8
0.63
0.9
72.4
37.8

Minor 5ss
28.4
-2.5
3.5
38.3
46.7

Minor BPS
47
-0.1
2
67.12
43.1

Associated Gene:

Gene:
FSTL4

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16628335 - 16829729
201395

16628335 - 16829729
201395