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Intron Name: Anas_platyrhynchos_platyrhynchos_14_16949309_16949861_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16949309 - 16949861

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTGGGGGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTTATTAACA

Flanking Amino Acid:

VVRTKVDDCQFVCIAQQDYW

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

53.6

0.08

1.2

43.9

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

73.2

0.73

1.5

81.71

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046385

16913322 - 17031820

118499

ENSAPLT00000032102

16913322 - 17031820

118499

ENSAPLT00000016587

16913322 - 17031820

118499