Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_16989432_16994912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16989432 - 16994912

Intron Length:

5481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

ACGTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

GGATGTTTAACC

Flanking Amino Acid:

IILEPSEMIVVENSKDNEEN

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

67.6

39.2

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

69.9

0.45

65.4

Minor 5ss

30.2

-2.3

3.2

35.2

42.4

Minor BPS

58.1

0.23

1.8

64.74

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032102

16913322 - 17031820

118499

ENSAPLT00000016587

16913322 - 17031820

118499

ENSAPLT00000046385

16913322 - 17031820

118499