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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17048967_17050153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17048967 - 17050153

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CTTTTCTCAGAG

Flanking Amino Acid:

LVSDLSHAVQHPVLDEPIAE

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

79.8

35.1

Major BPS

0.52

1.5

79.6

35.6

Major PPT

83.2

0.75

0.8

77.1

37.1

Minor 5ss

35.1

-1.7

2.7

42.1

44.6

Minor BPS

47.3

-0.3

1.9

56.47

44.8

Associated Gene:

Gene:

FNIP1

Ensembl Gene ID:

ENSAPLG00000002569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029928

17047213 - 17109195

61983

ENSAPLT00000029055

17047213 - 17109195

61983

ENSAPLT00000002650

17047213 - 17087726

40514