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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17053247_17055268_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17053247 - 17055268

Intron Length:

2022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGGTGG

5'SS Class:

weak_major

3'SS Sequence:

ATCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTCACCTGGAAA

Flanking Amino Acid:

TFLMENAAKNQFLPALLTAV

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.1

48.1

43.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

87.2

0.84

0.7

85.1

Minor 5ss

44.4

-0.6

3.1

60.1

45.7

Minor BPS

52.2

0.06

1.7

65.34

40.6

Associated Gene:

Gene:

FNIP1

Ensembl Gene ID:

ENSAPLG00000002569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029928

17047213 - 17109195

61983

ENSAPLT00000029055

17047213 - 17109195

61983

ENSAPLT00000002650

17047213 - 17087726

40514