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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17060770_17061580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17060770 - 17061580

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

GATTGTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TGTTACTTATCT

Flanking Amino Acid:

MNKLKSAIEQAMKMSRRSAD

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

67.5

0.39

1.2

64.1

45.9

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

67.8

0.64

1.8

86.16

39.4

Associated Gene:

Gene:

FNIP1

Ensembl Gene ID:

ENSAPLG00000002569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029928

17047213 - 17109195

61983

ENSAPLT00000029055

17047213 - 17109195

61983

ENSAPLT00000002650

17047213 - 17087726

40514