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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17202021_17202271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17202021 - 17202271

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAA

U12 Branch Point Sequence:

AAGACAGGAATG

Flanking Amino Acid:

LQGNTEISPPNNIILREEWE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.8

44.6

Major BPS

50.4

0.01

1.1

47.3

36.1

Major PPT

85.6

0.8

0.9

80.6

Minor 5ss

36.1

-1.6

3.2

49.4

46.3

Minor BPS

37.2

-1.1

2.1

38.03

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047861

17201771 - 17202776

1006