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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17226547_17228746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17226547 - 17228746

Intron Length:

2200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GTTTGCTCACTT

Flanking Amino Acid:

GNRLATFLNYMSDVEAGGAT

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

88.9

0.88

0.7

88.2

29.1

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

48.3

-0

2.2

72.73

44.5

Associated Gene:

Gene:

P4HA2

Ensembl Gene ID:

ENSAPLG00000003370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046612

17224632 - 17252066

27435