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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17227448_17228612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17227448 - 17228612

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTATTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGCCCTTTTATT

Flanking Amino Acid:

GNRVATFLNYVPSRRTPEX

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.6

0.71

0.8

77.4

29.7

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

55.1

0.24

1.6

69.85

41.3

Associated Gene:

Gene:

P4HA2

Ensembl Gene ID:

ENSAPLG00000003370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029919

17226546 - 17252066

25521