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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17228679_17228746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17228679 - 17228746

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCTTATTTAATT

Flanking Amino Acid:

GNRLATFLNYKDEPDAFKRL

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

82.1

0.72

0.8

76.8

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

72.5

0.78

1.4

84.41

36.8

Associated Gene:

Gene:

P4HA2

Ensembl Gene ID:

ENSAPLG00000003370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029919

17226546 - 17252066

25521

ENSAPLT00000003507

17224632 - 17252066

27435