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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17231279_17231988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17231279 - 17231988

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAT

U12 Branch Point Sequence:

TTGCAGTTGACA

Flanking Amino Acid:

LTVKTAELLQVANYGMGGQY

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.2

75.3

40.8

Major BPS

64.7

0.37

1.2

39.8

Major PPT

77.2

0.61

0.8

72.4

32.4

Minor 5ss

31.5

-2.1

2.4

35.1

40.7

Minor BPS

47.8

-0.1

2.2

64.92

41.4

Associated Gene:

Gene:

P4HA2

Ensembl Gene ID:

ENSAPLG00000003370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046612

17224632 - 17252066

27435

ENSAPLT00000029919

17226546 - 17252066

25521

ENSAPLT00000003507

17224632 - 17252066

27435