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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17234801_17235567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17234801 - 17235567

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTTTACTTAATG

Flanking Amino Acid:

ALCRGEGVKMTPRRQKRLFC

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

0.74

0.9

80.5

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

77.1

0.71

1.5

80.51

35.2

Associated Gene:

Gene:

P4HA2

Ensembl Gene ID:

ENSAPLG00000003370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046612

17224632 - 17252066

27435

ENSAPLT00000029919

17226546 - 17252066

25521

ENSAPLT00000003507

17224632 - 17252066

27435