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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17242964_17243822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17242964 - 17243822

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

GTGTGATTAACA

Flanking Amino Acid:

HTEAEFFTSIGQMTDLIYAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

76.6

33.7

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

0.76

0.8

Minor 5ss

37.7

-1.4

3.1

47.6

48.1

Minor BPS

55.6

0.17

2.1

69.37

42.6

Associated Gene:

Gene:

P4HA2

Ensembl Gene ID:

ENSAPLG00000003370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046612

17224632 - 17252066

27435

ENSAPLT00000029919

17226546 - 17252066

25521

ENSAPLT00000003507

17224632 - 17252066

27435