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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17243917_17250267_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

17243917 - 17250267

Intron Length:

6351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GAATATGGTACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTCCTTTGAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

37.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

58.1

0.18

1.2

49.8

47.4

Minor 5ss

40.8

-1

3.1

58.8

45.7

Minor BPS

70.2

0.72

1.4

85.92

33.5

Associated Gene:

Gene:

P4HA2

Ensembl Gene ID:

ENSAPLG00000003370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046612

17224632 - 17252066

27435

ENSAPLT00000029919

17226546 - 17252066

25521

ENSAPLT00000003507

17224632 - 17252066

27435