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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17292130_17300336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17292130 - 17300336

Intron Length:

8207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTAATTTTAAGC

Flanking Amino Acid:

CTDQLLLSVNRAEGKTWSPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

78.1

0.63

0.9

74.3

35.1

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

57.9

0.23

1.6

67.15

38.6

Associated Gene:

Gene:

PDLIM4

Ensembl Gene ID:

ENSAPLG00000003185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003255

17290095 - 17318820

28726