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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17326426_17331323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17326426 - 17331323

Intron Length:

4898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TGATCATGGACC

Flanking Amino Acid:

DVYRSTIVTEWNLVCEDDWK

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

52.3

0.05

1.8

65.88

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009530

17325760 - 17345599

19840