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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17368435_17371120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17368435 - 17371120

Intron Length:

2686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GATTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

CATTCATTGATT

Flanking Amino Acid:

DTIEQMLLVKGLEYRPASTR

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

85.4

0.8

77.2

41.6

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

63.5

0.5

1.6

77.07

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009612

17347289 - 17372528

25240