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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17440054_17451751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17440054 - 17451751

Intron Length:

11698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTGTTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.8

38.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

88.8

0.87

0.7

83.2

31.9

Minor 5ss

37.9

-1.4

2.9

40.9

45.3

Minor BPS

54.3

0.13

2.1

70.62

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039086

17440000 - 17471328

31329