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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17452405_17452647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17452405 - 17452647

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCC

5'SS Class:

strong_major

3'SS Sequence:

CGTTTGTATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATACTT

Flanking Amino Acid:

KGNSFVHDPKVAHETDVRAQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

33.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

63.6

0.31

1.2

Minor 5ss

-2.2

3.4

42.5

44.5

Minor BPS

53.1

0.17

1.9

77.83

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039086

17440000 - 17471328

31329

ENSAPLT00000012392

17451794 - 17479574

27781