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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17460304_17461381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17460304 - 17461381

Intron Length:

1078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGTATTTTATT

Flanking Amino Acid:

RDEMMGLKPIRQTVVELQER

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

74.6

0.55

1.1

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

56.1

0.27

1.8

76.33

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039086

17440000 - 17471328

31329

ENSAPLT00000012392

17451794 - 17479574

27781