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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17465526_17468062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17465526 - 17468062

Intron Length:

2537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

GCACCTATAAAA

Flanking Amino Acid:

DLDTYYKALDKAIMTFHSMK

Intron Amino Acid Position:

1130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

65.3

0.38

71.6

30.1

Major PPT

91.9

0.94

0.5

89.3

19.5

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

46.8

-0.2

1.7

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012392

17451794 - 17479574

27781

ENSAPLT00000039086

17440000 - 17471328

31329