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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17468149_17468609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17468149 - 17468609

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGTG

5'SS Class:

major

3'SS Sequence:

TTTTCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTTCATT

Flanking Amino Acid:

DLWRNTYRGQDIEYIEIRSD

Intron Amino Acid Position:

1159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

69.7

41.2

Major BPS

100

1.24

0.5

100

Major PPT

91.2

0.93

0.7

89.3

26.1

Minor 5ss

34.6

-1.8

3.5

48.8

47.4

Minor BPS

60.5

0.41

1.7

78.3

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012392

17451794 - 17479574

27781

ENSAPLT00000039086

17440000 - 17471328

31329