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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17470794_17471133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17470794 - 17471133

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TATCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAGAT

U12 Branch Point Sequence:

TTACACTGAATA

Flanking Amino Acid:

NIESLAHALVEIIKNRTKQR

Intron Amino Acid Position:

1251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

80.7

33.7

Major BPS

71.4

0.53

39.8

Major PPT

82.1

0.72

0.7

77.6

30.7

Minor 5ss

38.7

-1.3

2.8

47.9

41.8

Minor BPS

56.2

0.19

1.6

68.29

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039086

17440000 - 17471328

31329

ENSAPLT00000012392

17451794 - 17479574

27781