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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17480194_17480627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17480194 - 17480627

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAAG

5'SS Class:

major

3'SS Sequence:

TCCTCTCCGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

ATGGCTCTAACG

Flanking Amino Acid:

VAQVAFTDRKLSEHDLLCQA

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.6

40.1

Major BPS

72.3

0.55

73.3

28.9

Major PPT

71.6

0.49

0.9

65.4

36.2

Minor 5ss

38.4

-1.3

2.9

48.5

47.2

Minor BPS

50.3

-0.1

1.9

58.04

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011856

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022298

17478649 - 17482408

3760