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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17563361_17565061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17563361 - 17565061

Intron Length:

1701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATCCCGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTTCATC

Flanking Amino Acid:

IDSNTDAEEKQSLNERHKLL

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

100

1.24

0.5

100

Major PPT

0.38

0.9

66.8

35.5

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

58.5

0.25

1.7

69.9

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024779

17563106 - 17582676

19571

ENSAPLT00000047002

17563106 - 17598672

35567