Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_1759907_1761522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1759907 - 1761522

Intron Length:

1616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTCTCTTACAG

Flanking Amino Acid:

YDNKLRPDIGVKPTVIHTDM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

86.5

0.82

0.8

80.4

31.7

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

55.6

0.04

1.8

65.72

41.9

Associated Gene:

Gene:

GABRG2

Ensembl Gene ID:

ENSAPLG00000014042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026149

1731191 - 1807826

76636

ENSAPLT00000014679

1731191 - 1807826

76636