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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17603939_17607167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17603939 - 17607167

Intron Length:

3229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTCTG

5'SS Class:

major

3'SS Sequence:

GCTGTCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGAGTTCTAATT

Flanking Amino Acid:

GTDSCVGLQQAL*

Intron Amino Acid Position:

1159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

65.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.4

0.48

0.9

62.4

39.8

Minor 5ss

39.3

-1.2

2.8

46.3

Minor BPS

48.7

-0

1.7

65.4

39.7

Associated Gene:

Gene:

AFF4

Ensembl Gene ID:

ENSAPLG00000011166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034499

17603249 - 17639631

36383