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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17607772_17614093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17607772 - 17614093

Intron Length:

6322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

GTATTATTATCA

Flanking Amino Acid:

QAEQLSKEQKGLYLKY*

Intron Amino Acid Position:

1129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

84.7

0.86

74.3

40.7

Major PPT

75.6

0.58

0.9

72.2

32.6

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

52.2

0.07

1.8

66.08

39.8

Associated Gene:

Gene:

AFF4

Ensembl Gene ID:

ENSAPLG00000011166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011682

17607752 - 17639631

31880