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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17617806_17618471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17617806 - 17618471

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

GAGTCCGTAAGT

Flanking Amino Acid:

SRRAKLVFDDRTYSADHYLQ

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

0.7

0.8

76.7

31.9

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

49.6

0.05

2.3

69.71

46.7

Associated Gene:

Gene:

AFF4

Ensembl Gene ID:

ENSAPLG00000011166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011682

17607752 - 17639631

31880

ENSAPLT00000045366

17612756 - 17639631

26876

ENSAPLT00000041772

17603249 - 17639631

36383

ENSAPLT00000039108

17611352 - 17639627

28276

ENSAPLT00000034499

17603249 - 17639631

36383