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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17618570_17620658_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17618570 - 17620658

Intron Length:

2089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGGC

5'SS Class:

major

3'SS Sequence:

ATTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

AGTTTATGATTT

Flanking Amino Acid:

KGSSSTKETKEKILNNSSNC

Intron Amino Acid Position:

886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.2

39.3

Major BPS

84.6

0.86

41.2

Major PPT

88.5

0.87

0.7

85.9

27.9

Minor 5ss

28.9

-2.4

3.6

41.1

45.6

Minor BPS

-0.2

1.9

65.04

39.4

Associated Gene:

Gene:

AFF4

Ensembl Gene ID:

ENSAPLG00000011166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011682

17607752 - 17639631

31880

ENSAPLT00000045366

17612756 - 17639631

26876

ENSAPLT00000041772

17603249 - 17639631

36383

ENSAPLT00000039108

17611352 - 17639627

28276

ENSAPLT00000034499

17603249 - 17639631

36383