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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1762807_1767807_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1762807 - 1767807

Intron Length:
5001

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATTTACA

5'SS Class:
major

3'SS Sequence:
TCTTTCTCCTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTCAG

U12 Branch Point Sequence:
ATAACCTTATCT

Flanking Amino Acid:
WNDGRVLYTLRLTIDAECQL

Intron Amino Acid Position:
182

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1
75.2
34

Major BPS
71
0.52
1.5
79.6
35.6

Major PPT
85.9
0.81
0.6
84.7
23

Minor 5ss
42.2
-0.9
2.4
52.6
43.9

Minor BPS
66.6
0.6
1.6
80.56
40.6

Associated Gene:

Gene:
GABRG2

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1731191 - 1807826
76636

1731191 - 1807826
76636