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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17628990_17630492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17628990 - 17630492

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GAGTTTAAAACT

Flanking Amino Acid:

QQSSFGTGEQKRYNPSSKTS

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.8

33.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

91.4

0.93

0.6

85.5

29.2

Minor 5ss

40.6

-1.1

2.8

47.9

41.8

Minor BPS

46.3

-0.2

1.9

62.04

42.1

Associated Gene:

Gene:

AFF4

Ensembl Gene ID:

ENSAPLG00000011166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041772

17603249 - 17639631

36383

ENSAPLT00000039108

17611352 - 17639627

28276

ENSAPLT00000034499

17603249 - 17639631

36383

ENSAPLT00000011682

17607752 - 17639631

31880

ENSAPLT00000045366

17612756 - 17639631

26876