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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17630530_17635704_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17630530 - 17635704

Intron Length:

5175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTC

Flanking Amino Acid:

EPSKFPFPTKESQQSSFGTG

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.2

0.66

0.7

78.3

30.4

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

0.17

1.5

63.33

37.2

Associated Gene:

Gene:

AFF4

Ensembl Gene ID:

ENSAPLG00000011166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011682

17607752 - 17639631

31880

ENSAPLT00000045366

17612756 - 17639631

26876

ENSAPLT00000041772

17603249 - 17639631

36383

ENSAPLT00000039108

17611352 - 17639627

28276

ENSAPLT00000034499

17603249 - 17639631

36383