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Intron Name: Anas_platyrhynchos_platyrhynchos_14_17677934_17679505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17677934 - 17679505

Intron Length:

1572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTCCCCTGACAA

Flanking Amino Acid:

RSIGAAAKSQVISNAKNTVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

87.2

0.84

0.6

81.3

30.8

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

48.7

-0.1

1.9

63.18

42.6

Associated Gene:

Gene:

HSPA4

Ensembl Gene ID:

ENSAPLG00000002687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002753

17674987 - 17690317

15331